Here is a list of all documented struct and union fields with links to the struct/union documentation for each field:

- p -

• pAddToSolutionQueue() : LoopTable
• Panchenko() : Panchenko
• parsePDBline() : PdbLoader
• patchAminoAcidCode() : SideChain
• patchBetaPosition() : AminoAcid
• pCalcFracBuried() : EffectiveSolvationPotential
• pCalculateMatrix() : Align , FSAlign , NWAlign , NWAlignNoTermGaps , SWAlign
• pCalculateRawFrequency() : HenikoffProfile , Profile , PSICProfile , SeqDivergenceProfile
• pCalculateWeight() : HenikoffProfile , PSICProfile , SeqDivergenceProfile
• pConstructData() : HenikoffProfile , Profile , PSICProfile , SeqDivergenceProfile , PhiPsi , PhiPsiOmega , PhiPsiOmegaChi1 , PhiPsiOmegaChi1Chi2 , PhiPsiOmegaChi1Chi2PreAngle , PhiPsiOmegaPreAngle , PhiPsiPreAngle
• pConstructMaxPropensities() : PhiPsi , PhiPsiOmega , PhiPsiOmegaChi1Chi2 , PhiPsiOmegaChi1Chi2PreAngle , PhiPsiOmegaPreAngle , PhiPsiPreAngle
• pConstructMinPropensities() : PhiPsi , PhiPsiOmega , PhiPsiOmegaChi1Chi2
• PdbLoader() : PdbLoader
• PdbSaver() : PdbSaver
• Pearson() : Pearson
• penaltyAdd : Align
• penaltyMul : Align
• pEstimateSimilarityCutoff() : LoopTable
• pExtractPdbInfo() : VGPFunction
• pExtractSecInfo() : VGPFunction2
• pGetAtom() : Group
• pGetBin() : LoopTable
• pGetDistanceBinOne() : RapdfPotential
• pGetGroupBin() : RapdfPotential
• pGetMaxPropensities() : PhiPsi , PhiPsiOmega , PhiPsiOmegaChi1Chi2 , PhiPsiOmegaChi1Chi2PreAngle , PhiPsiOmegaPreAngle , PhiPsiPreAngle
• pGetMinPropensities() : PhiPsi , PhiPsiOmega , PhiPsiOmegaChi1Chi2
• PhiPsi() : PhiPsi
• PhiPsiOmega() : PhiPsiOmega
• PhiPsiOmegaChi1Chi2() : PhiPsiOmegaChi1Chi2
• PhiPsiOmegaChi1Chi2PreAngle() : PhiPsiOmegaChi1Chi2PreAngle
• PhiPsiOmegaPreAngle() : PhiPsiOmegaPreAngle
• PhiPsiPreAngle() : PhiPsiPreAngle
• pInsertElem() : LoopTable
• pLoadFactor() : AtchleyCorrelation , AtchleyDistance
• pModifyMatrix() : Align
• PolarSolvationPotential() : PolarSolvationPotential
• pReadDoubleVector() : PssmInput , Ss2Input , Substitution , ThreadingInput
• pReadString() : ProfInput
• pResetData() : Profile , PhiPsi , PhiPsiOmega , PhiPsiOmegaChi1 , PhiPsiOmegaChi1Chi2 , PhiPsiOmegaChi1Chi2PreAngle , PhiPsiOmegaChi1PreAngle , PhiPsiOmegaPreAngle , PhiPsiPreAngle
• pReturnMaxPropensities() : PhiPsi , PhiPsiOmega , PhiPsiOmegaChi1Chi2 , PhiPsiOmegaChi1Chi2PreAngle , PhiPsiOmegaPreAngle , PhiPsiPreAngle
• pReturnMaxPropensitiesPreAngle() : PhiPsiOmegaChi1Chi2PreAngle , PhiPsiOmegaPreAngle , PhiPsiPreAngle
• pReturnMaxPropensity() : SolvationPotential
• pReturnMinPropensities() : PhiPsi , PhiPsiOmega , PhiPsiOmegaChi1Chi2
• pReturnMinPropensity() : SolvationPotential
• printComponents() : Spacer
• printCorrelation() : RankAnalyzer
• printGaps() : Spacer
• printHeader() : RankAnalyzer
• printSubSpacerList() : Spacer
• printTable() : LoopTable , LoopTableEntry
• printTopXResults() : RankAnalyzer
• Prof() : Prof
• profAliFrequency : Profile
• Profile() : Profile
• ProfInput() : ProfInput
• pSaveAtomVector() : IntSaver , XyzSaver
• PSICProfile() : PSICProfile
• PssmInput() : PssmInput
• pUnbindIn() : SimpleBond
• pUnbindOut() : SimpleBond
• purgeTargetInsertions() : AlignmentBase
• pWriteDoubleVector() : PssmInput , Ss2Input , Substitution , ThreadingInput
• pWriteString() : ProfInput