SeqConstructor Class Reference

This class builds a spacer by concatenating the same aminoacid type for n times. More...

Public Member Functions
virtual Spacer &	makeSpacer (string type, unsigned int n)

Protected Member Functions
void	buildAminoAcid (AminoAcid &aa, AminoAcid *prev)
virtual void	loadReference ()

Detailed Description

This class builds a spacer by concatenating the same aminoacid type for n times.

Member Function Documentation

void buildAminoAcid ( AminoAcid &  aa, AminoAcid *  prev  )

protected

Binds the AminoAcid with the previous one.

Parameters

aa
prev

void loadReference ( )

protectedvirtual

Helper function to load the reference file. (same as in SeqLoader)

Spacer & makeSpacer ( string  type, unsigned int  n  )

virtual

Creates a Spacer with only one type of AminoAcid

Parameters

type	The type of the AminoAcid
n	The length of the Spacer

Returns

The Spacer

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The documentation for this class was generated from the following files:

• Biopool/Sources/SeqConstructor.h
• Biopool/Sources/SeqConstructor.cc